STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ26553.1Thiamine kinase. (314 aa)    
Predicted Functional Partners:
SDZ26565.1
Amino acid/polyamine/organocation transporter, APC superfamily.
 
 
   0.903
SDZ26533.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
     0.872
SDY55756.1
Hypothetical protein.
    
  0.762
SDZ26588.1
L-glutamine synthetase.
 
     0.588
SDZ54371.1
Hypothetical protein.
  
 
 0.571
SDY77592.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
 
     0.548
SDY54935.1
Protein of unknown function.
  
     0.536
SDZ26576.1
DNA-binding transcriptional regulator, FadR family.
       0.508
thiL
Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
     
 0.499
SDY79747.1
Ethanolamine-phosphate cytidylyltransferase.
     
 0.495
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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