Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY61033.1 | SDY63152.1 | SAMN05421684_0620 | SAMN05421684_0722 | Serine phosphatase RsbU, regulator of sigma subunit. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.743 |
SDY61033.1 | SDY77128.1 | SAMN05421684_0620 | SAMN05421684_1463 | Serine phosphatase RsbU, regulator of sigma subunit. | Response regulator receiver domain-containing protein. | 0.896 |
SDY61033.1 | SDY77165.1 | SAMN05421684_0620 | SAMN05421684_1465 | Serine phosphatase RsbU, regulator of sigma subunit. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.943 |
SDY61033.1 | SDY77184.1 | SAMN05421684_0620 | SAMN05421684_1466 | Serine phosphatase RsbU, regulator of sigma subunit. | Serine/threonine-protein kinase RsbT. | 0.429 |
SDY61033.1 | SDY89508.1 | SAMN05421684_0620 | SAMN05421684_2143 | Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.977 |
SDY61033.1 | SDY90388.1 | SAMN05421684_0620 | SAMN05421684_2200 | Serine phosphatase RsbU, regulator of sigma subunit. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.539 |
SDY61033.1 | SDZ19122.1 | SAMN05421684_0620 | SAMN05421684_3354 | Serine phosphatase RsbU, regulator of sigma subunit. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.555 |
SDY61033.1 | SDZ19243.1 | SAMN05421684_0620 | SAMN05421684_3364 | Serine phosphatase RsbU, regulator of sigma subunit. | Histidine kinase-like ATPase domain-containing protein. | 0.595 |
SDY61033.1 | SDZ26682.1 | SAMN05421684_0620 | SAMN05421684_3978 | Serine phosphatase RsbU, regulator of sigma subunit. | Anti-anti-sigma factor. | 0.963 |
SDY61033.1 | SDZ63670.1 | SAMN05421684_0620 | SAMN05421684_7565 | Serine phosphatase RsbU, regulator of sigma subunit. | HD domain-containing protein. | 0.974 |
SDY63152.1 | SDY61033.1 | SAMN05421684_0722 | SAMN05421684_0620 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Serine phosphatase RsbU, regulator of sigma subunit. | 0.743 |
SDY63152.1 | SDY77128.1 | SAMN05421684_0722 | SAMN05421684_1463 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Response regulator receiver domain-containing protein. | 0.555 |
SDY63152.1 | SDY89508.1 | SAMN05421684_0722 | SAMN05421684_2143 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Hypothetical protein. | 0.542 |
SDY63152.1 | SDZ26682.1 | SAMN05421684_0722 | SAMN05421684_3978 | Anti-sigma regulatory factor (Ser/Thr protein kinase). | Anti-anti-sigma factor. | 0.634 |
SDY77128.1 | SDY61033.1 | SAMN05421684_1463 | SAMN05421684_0620 | Response regulator receiver domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.896 |
SDY77128.1 | SDY63152.1 | SAMN05421684_1463 | SAMN05421684_0722 | Response regulator receiver domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.555 |
SDY77128.1 | SDY77165.1 | SAMN05421684_1463 | SAMN05421684_1465 | Response regulator receiver domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.988 |
SDY77128.1 | SDY77184.1 | SAMN05421684_1463 | SAMN05421684_1466 | Response regulator receiver domain-containing protein. | Serine/threonine-protein kinase RsbT. | 0.967 |
SDY77128.1 | SDY89508.1 | SAMN05421684_1463 | SAMN05421684_2143 | Response regulator receiver domain-containing protein. | Hypothetical protein. | 0.918 |
SDY77128.1 | SDY90388.1 | SAMN05421684_1463 | SAMN05421684_2200 | Response regulator receiver domain-containing protein. | Anti-sigma regulatory factor (Ser/Thr protein kinase). | 0.618 |
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