STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ27511.1Predicted ATPase. (862 aa)    
Predicted Functional Partners:
SDZ60617.1
DNA-binding transcriptional activator of the SARP family.
  
    0.672
SDZ43530.1
DNA-binding transcriptional activator of the SARP family.
  
    0.643
SDZ27491.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
    0.577
SDZ27463.1
Phosphoserine phosphatase.
       0.576
SDZ27471.1
Acetyl esterase.
       0.576
SDZ27482.1
Hypothetical protein.
       0.576
SDZ27500.1
Hypothetical protein.
       0.576
SDZ50990.1
DNA-binding transcriptional activator of the SARP family.
  
    0.549
SDZ60885.1
DNA-binding transcriptional activator of the SARP family.
 
    0.513
SDZ58538.1
DNA-binding transcriptional activator of the SARP family.
 
    0.508
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.