Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ35310.1 | SDZ35318.1 | SAMN05421684_4798 | SAMN05421684_4799 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDZ35310.1 | SDZ35321.1 | SAMN05421684_4798 | SAMN05421684_4800 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDZ35310.1 | SDZ35339.1 | SAMN05421684_4798 | SAMN05421684_4801 | Hypothetical protein. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.773 |
SDZ35310.1 | SDZ35351.1 | SAMN05421684_4798 | SAMN05421684_4802 | Hypothetical protein. | VWA domain containing CoxE-like protein. | 0.581 |
SDZ35310.1 | SDZ35362.1 | SAMN05421684_4798 | SAMN05421684_4803 | Hypothetical protein. | Hypothetical protein. | 0.581 |
SDZ35310.1 | SDZ35374.1 | SAMN05421684_4798 | SAMN05421684_4804 | Hypothetical protein. | AAA domain (dynein-related subfamily). | 0.581 |
SDZ35310.1 | SDZ35391.1 | SAMN05421684_4798 | SAMN05421684_4805 | Hypothetical protein. | SWIM zinc finger. | 0.581 |
SDZ35310.1 | aspS-2 | SAMN05421684_4798 | SAMN05421684_4806 | Hypothetical protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.401 |
SDZ35318.1 | SDZ35310.1 | SAMN05421684_4799 | SAMN05421684_4798 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDZ35318.1 | SDZ35321.1 | SAMN05421684_4799 | SAMN05421684_4800 | Hypothetical protein. | Hypothetical protein. | 0.779 |
SDZ35318.1 | SDZ35339.1 | SAMN05421684_4799 | SAMN05421684_4801 | Hypothetical protein. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.779 |
SDZ35318.1 | SDZ35351.1 | SAMN05421684_4799 | SAMN05421684_4802 | Hypothetical protein. | VWA domain containing CoxE-like protein. | 0.581 |
SDZ35318.1 | SDZ35362.1 | SAMN05421684_4799 | SAMN05421684_4803 | Hypothetical protein. | Hypothetical protein. | 0.581 |
SDZ35318.1 | SDZ35374.1 | SAMN05421684_4799 | SAMN05421684_4804 | Hypothetical protein. | AAA domain (dynein-related subfamily). | 0.581 |
SDZ35318.1 | SDZ35391.1 | SAMN05421684_4799 | SAMN05421684_4805 | Hypothetical protein. | SWIM zinc finger. | 0.581 |
SDZ35318.1 | aspS-2 | SAMN05421684_4799 | SAMN05421684_4806 | Hypothetical protein. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.465 |
SDZ35321.1 | SDZ35310.1 | SAMN05421684_4800 | SAMN05421684_4798 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SDZ35321.1 | SDZ35318.1 | SAMN05421684_4800 | SAMN05421684_4799 | Hypothetical protein. | Hypothetical protein. | 0.779 |
SDZ35321.1 | SDZ35339.1 | SAMN05421684_4800 | SAMN05421684_4801 | Hypothetical protein. | YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.786 |
SDZ35321.1 | SDZ35351.1 | SAMN05421684_4800 | SAMN05421684_4802 | Hypothetical protein. | VWA domain containing CoxE-like protein. | 0.581 |
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