STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ35667.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
SDY55756.1
Hypothetical protein.
    
 0.991
SDZ33373.1
ATP-dependent helicase HrpA.
    
 0.964
SDZ49124.1
ATP-dependent helicase HrpB.
    
 0.964
SDZ54371.1
Hypothetical protein.
   
 0.916
SDY58324.1
Superfamily II DNA and RNA helicase.
    
 0.912
SDY61513.1
Superfamily II DNA and RNA helicase.
    
 0.912
SDY68205.1
Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family.
    
 0.912
SDZ31329.1
Hypothetical protein.
    
 0.901
SDZ35827.1
Guanylate kinase; Manually curated.
    
 0.901
SDZ43955.1
Molecular chaperone HtpG.
    
 0.813
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.