STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ45068.1phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (424 aa)    
Predicted Functional Partners:
SDY62058.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 
 0.975
SDY97895.1
acyl-CoA thioesterase.
 
 
 0.975
SDY62037.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 
 0.969
SDY62076.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 
 0.969
SDY62108.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
  
 0.966
SDY62134.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.959
SDZ47067.1
Amino acid adenylation domain-containing protein.
    
 0.880
SDZ47170.1
Non-ribosomal peptide synthetase component F.
    
 0.880
SDY73812.1
Amidase.
    
  0.856
SDZ59863.1
Non-ribosomal peptide synthase domain TIGR01720.
 
  
 0.847
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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