Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ44098.1 | SDZ45108.1 | SAMN05421684_5063 | SAMN05421684_5181 | Polyketide synthase 2/polyketide synthase 5. | Acyl-CoA dehydrogenase. | 0.765 |
SDZ44098.1 | SDZ45117.1 | SAMN05421684_5063 | SAMN05421684_5182 | Polyketide synthase 2/polyketide synthase 5. | Acyl-CoA dehydrogenase. | 0.765 |
SDZ44098.1 | SDZ45128.1 | SAMN05421684_5063 | SAMN05421684_5183 | Polyketide synthase 2/polyketide synthase 5. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.715 |
SDZ44098.1 | SDZ46930.1 | SAMN05421684_5063 | SAMN05421684_5383 | Polyketide synthase 2/polyketide synthase 5. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.999 |
SDZ44098.1 | SDZ47067.1 | SAMN05421684_5063 | SAMN05421684_5398 | Polyketide synthase 2/polyketide synthase 5. | Amino acid adenylation domain-containing protein. | 0.999 |
SDZ44098.1 | SDZ47170.1 | SAMN05421684_5063 | SAMN05421684_5415 | Polyketide synthase 2/polyketide synthase 5. | Non-ribosomal peptide synthetase component F. | 0.999 |
SDZ44098.1 | SDZ47182.1 | SAMN05421684_5063 | SAMN05421684_5417 | Polyketide synthase 2/polyketide synthase 5. | Acyl transferase domain-containing protein. | 0.999 |
SDZ44098.1 | SDZ59830.1 | SAMN05421684_5063 | SAMN05421684_6943 | Polyketide synthase 2/polyketide synthase 5. | PfaB family protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
SDZ44098.1 | SDZ59863.1 | SAMN05421684_5063 | SAMN05421684_6948 | Polyketide synthase 2/polyketide synthase 5. | Non-ribosomal peptide synthase domain TIGR01720. | 0.999 |
SDZ45108.1 | SDZ44098.1 | SAMN05421684_5181 | SAMN05421684_5063 | Acyl-CoA dehydrogenase. | Polyketide synthase 2/polyketide synthase 5. | 0.765 |
SDZ45108.1 | SDZ45117.1 | SAMN05421684_5181 | SAMN05421684_5182 | Acyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase. | 0.995 |
SDZ45108.1 | SDZ45128.1 | SAMN05421684_5181 | SAMN05421684_5183 | Acyl-CoA dehydrogenase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.784 |
SDZ45108.1 | SDZ45140.1 | SAMN05421684_5181 | SAMN05421684_5184 | Acyl-CoA dehydrogenase. | Transcriptional regulator, TetR family. | 0.806 |
SDZ45108.1 | SDZ46930.1 | SAMN05421684_5181 | SAMN05421684_5383 | Acyl-CoA dehydrogenase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.576 |
SDZ45108.1 | SDZ47067.1 | SAMN05421684_5181 | SAMN05421684_5398 | Acyl-CoA dehydrogenase. | Amino acid adenylation domain-containing protein. | 0.902 |
SDZ45108.1 | SDZ47170.1 | SAMN05421684_5181 | SAMN05421684_5415 | Acyl-CoA dehydrogenase. | Non-ribosomal peptide synthetase component F. | 0.902 |
SDZ45108.1 | SDZ47182.1 | SAMN05421684_5181 | SAMN05421684_5417 | Acyl-CoA dehydrogenase. | Acyl transferase domain-containing protein. | 0.475 |
SDZ45108.1 | SDZ59863.1 | SAMN05421684_5181 | SAMN05421684_6948 | Acyl-CoA dehydrogenase. | Non-ribosomal peptide synthase domain TIGR01720. | 0.812 |
SDZ45117.1 | SDZ44098.1 | SAMN05421684_5182 | SAMN05421684_5063 | Acyl-CoA dehydrogenase. | Polyketide synthase 2/polyketide synthase 5. | 0.765 |
SDZ45117.1 | SDZ45108.1 | SAMN05421684_5182 | SAMN05421684_5181 | Acyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase. | 0.995 |
page 1 of 5