STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ47592.1Subtilase family protein. (403 aa)    
Predicted Functional Partners:
SDZ47605.1
Hypothetical protein.
 
     0.840
SDZ47599.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.835
SDZ50859.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
 
  0.785
SDY49771.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  
  0.781
SDY49786.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  
  0.780
SDZ47584.1
CHAT domain-containing protein.
 
     0.731
SDZ44146.1
Type VII secretion-associated serine protease mycosin.
  
     0.725
SDY55341.1
Type VII secretion-associated serine protease mycosin.
  
     0.719
SDZ22407.1
Conserved repeat domain-containing protein.
  
 
  0.639
SDZ65930.1
Subtilase family protein.
  
     0.637
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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