STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ48961.1Multiple sugar transport system permease protein. (281 aa)    
Predicted Functional Partners:
SDZ48967.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
   0.962
SDZ48974.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.944
SDZ60808.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.870
SDZ67295.1
Multiple sugar transport system permease protein.
  
  0.862
SDY97928.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.861
SDZ47388.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.861
SDZ59085.1
Multiple sugar transport system permease protein.
 
  0.861
SDZ23166.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.860
SDZ50293.1
Multiple sugar transport system permease protein.
  
 0.858
SDZ62199.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.856
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.