STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ49061.1Hypothetical protein. (360 aa)    
Predicted Functional Partners:
SDZ49046.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.689
SDZ49054.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
       0.689
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.677
SDZ67786.1
Hypothetical protein.
  
 0.636
rpsF
Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
   0.611
SDZ23469.1
Putative adhesin.
  
 
   0.596
SDZ52575.1
Putative adhesin.
  
 
   0.593
SDY49345.1
TolB protein.
  
  0.574
SDY49391.1
TolB protein.
  
  0.574
SDY60127.1
WD40-like Beta Propeller Repeat.
  
  0.574
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.