STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ52323.1Hydrogenase maturation protein HypF. (843 aa)    
Predicted Functional Partners:
SDZ52301.1
Hydrogenase maturation protein, carbamoyl dehydratase HypE.
 
 
 0.997
SDZ52310.1
Hydrogenase expression/formation protein HypD.
 
  
 0.973
SDZ52317.1
Hydrogenase expression/formation protein HypC.
 
 
 0.972
SDZ52332.1
Hydrogenase maturation protease.
 
   
 0.924
SDZ52377.1
[NiFe]-hydrogenase I apoprotein, large subunit.
 
 
 
 0.913
hypA
Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.906
SDZ52400.1
Hydrogenase nickel incorporation protein HypB.
 
   
 0.904
SDZ52384.1
[NiFe]-hydrogenase I apoprotein, small subunit.
 
 
 
 0.896
SDZ52297.1
Hypothetical protein; Manually curated.
       0.794
SDZ52288.1
Thiopurine S-methyltransferase (TPMT).
   
   0.764
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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