STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ52354.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
SDZ52362.1
Hypothetical protein.
 
     0.958
SDZ52368.1
Hypothetical protein.
 
     0.958
SDZ52377.1
[NiFe]-hydrogenase I apoprotein, large subunit.
 
     0.958
SDZ52346.1
Hypothetical protein.
 
     0.953
SDZ52384.1
[NiFe]-hydrogenase I apoprotein, small subunit.
 
     0.947
SDZ52332.1
Hydrogenase maturation protease.
 
     0.911
SDZ29217.1
Hypothetical protein.
 
     0.804
hypA
Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
     0.776
SDZ52297.1
Hypothetical protein; Manually curated.
 
     0.750
SDZ52323.1
Hydrogenase maturation protein HypF.
 
     0.690
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.