STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ53282.1Catechol 2,3-dioxygenase. (134 aa)    
Predicted Functional Partners:
SDZ53288.1
Hypothetical protein.
       0.773
SDY93630.1
Probable phosphoglycerate mutase.
      0.762
SDZ22714.1
(R)-ethylmalonyl-CoA mutase.
    
 0.734
SDZ14027.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.591
SDZ66776.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 
  0.545
SDZ50129.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.544
SDZ53294.1
Ricin-type beta-trefoil lectin domain-containing protein.
       0.538
SDZ44098.1
Polyketide synthase 2/polyketide synthase 5.
  
 0.417
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.