STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ54135.1Short-chain dehydrogenase. (287 aa)    
Predicted Functional Partners:
SDZ47067.1
Amino acid adenylation domain-containing protein.
  
 0.919
SDZ47170.1
Non-ribosomal peptide synthetase component F.
  
 0.919
SDZ59863.1
Non-ribosomal peptide synthase domain TIGR01720.
  
 
 0.867
SDZ54128.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
 
     0.853
SDZ54149.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
    0.839
SDZ47182.1
Acyl transferase domain-containing protein.
   
 0.752
SDZ54117.1
Transcriptional regulator, TetR family.
 
     0.746
SDZ44098.1
Polyketide synthase 2/polyketide synthase 5.
   
 0.725
SDZ46930.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.723
SDY97681.1
Glutamate synthase (NADH) large subunit.
    
  0.709
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.