Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY94576.1 | SDZ23806.1 | SAMN05421684_2480 | SAMN05421684_3740 | Regulatory protein, luxR family; Manually curated. | FtsX-like permease family protein. | 0.754 |
SDY94576.1 | SDZ23817.1 | SAMN05421684_2480 | SAMN05421684_3741 | Regulatory protein, luxR family; Manually curated. | Hypothetical protein. | 0.739 |
SDY94576.1 | SDZ52189.1 | SAMN05421684_2480 | SAMN05421684_6167 | Regulatory protein, luxR family; Manually curated. | Chlorophyll synthase. | 0.665 |
SDY94576.1 | SDZ55571.1 | SAMN05421684_2480 | SAMN05421684_6647 | Regulatory protein, luxR family; Manually curated. | Transglutaminase-like superfamily protein. | 0.449 |
SDZ23806.1 | SDY94576.1 | SAMN05421684_3740 | SAMN05421684_2480 | FtsX-like permease family protein. | Regulatory protein, luxR family; Manually curated. | 0.754 |
SDZ23806.1 | SDZ23817.1 | SAMN05421684_3740 | SAMN05421684_3741 | FtsX-like permease family protein. | Hypothetical protein. | 0.838 |
SDZ23806.1 | SDZ52189.1 | SAMN05421684_3740 | SAMN05421684_6167 | FtsX-like permease family protein. | Chlorophyll synthase. | 0.655 |
SDZ23806.1 | SDZ55571.1 | SAMN05421684_3740 | SAMN05421684_6647 | FtsX-like permease family protein. | Transglutaminase-like superfamily protein. | 0.420 |
SDZ23817.1 | SDY94576.1 | SAMN05421684_3741 | SAMN05421684_2480 | Hypothetical protein. | Regulatory protein, luxR family; Manually curated. | 0.739 |
SDZ23817.1 | SDZ23806.1 | SAMN05421684_3741 | SAMN05421684_3740 | Hypothetical protein. | FtsX-like permease family protein. | 0.838 |
SDZ23817.1 | SDZ52189.1 | SAMN05421684_3741 | SAMN05421684_6167 | Hypothetical protein. | Chlorophyll synthase. | 0.640 |
SDZ23817.1 | SDZ55571.1 | SAMN05421684_3741 | SAMN05421684_6647 | Hypothetical protein. | Transglutaminase-like superfamily protein. | 0.456 |
SDZ34487.1 | SDZ55571.1 | SAMN05421684_4726 | SAMN05421684_6647 | Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist. | Transglutaminase-like superfamily protein. | 0.433 |
SDZ52189.1 | SDY94576.1 | SAMN05421684_6167 | SAMN05421684_2480 | Chlorophyll synthase. | Regulatory protein, luxR family; Manually curated. | 0.665 |
SDZ52189.1 | SDZ23806.1 | SAMN05421684_6167 | SAMN05421684_3740 | Chlorophyll synthase. | FtsX-like permease family protein. | 0.655 |
SDZ52189.1 | SDZ23817.1 | SAMN05421684_6167 | SAMN05421684_3741 | Chlorophyll synthase. | Hypothetical protein. | 0.640 |
SDZ52189.1 | SDZ55571.1 | SAMN05421684_6167 | SAMN05421684_6647 | Chlorophyll synthase. | Transglutaminase-like superfamily protein. | 0.479 |
SDZ55547.1 | SDZ55553.1 | SAMN05421684_6644 | SAMN05421684_6645 | Uncharacterized protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.773 |
SDZ55547.1 | SDZ55561.1 | SAMN05421684_6644 | SAMN05421684_6646 | Uncharacterized protein. | Hypothetical protein. | 0.576 |
SDZ55547.1 | SDZ55571.1 | SAMN05421684_6644 | SAMN05421684_6647 | Uncharacterized protein. | Transglutaminase-like superfamily protein. | 0.479 |
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