STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ59115.1ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (264 aa)    
Predicted Functional Partners:
SDZ59110.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.983
SDZ20913.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.930
SDZ20955.1
NitT/TauT family transport system ATP-binding protein.
 
  0.926
SDZ62519.1
Sulfonate transport system substrate-binding protein.
 
 
  0.921
SDY81841.1
NitT/TauT family transport system ATP-binding protein.
 
  0.903
SDZ53859.1
NitT/TauT family transport system ATP-binding protein.
 
  0.878
SDZ64669.1
NitT/TauT family transport system ATP-binding protein.
 
  0.877
ssuB
Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
  0.859
SDZ59125.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 
0.841
SDY81800.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.798
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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