STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ60853.1Minimal PKS ketosynthase (KS/KS alpha); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (414 aa)    
Predicted Functional Partners:
accA
acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
 
 
 0.998
SDZ44098.1
Polyketide synthase 2/polyketide synthase 5.
 
0.991
SDY92604.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.986
SDZ47067.1
Amino acid adenylation domain-containing protein.
 
 0.986
SDZ47155.1
Acyl transferase domain-containing protein.
 
0.985
SDZ47170.1
Non-ribosomal peptide synthetase component F.
 
 0.984
SDZ59830.1
PfaB family protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
0.980
SDZ59863.1
Non-ribosomal peptide synthase domain TIGR01720.
 
 0.977
fabH
3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
 
 0.973
SDZ21679.1
3-oxoacyl-[acyl-carrier-protein] synthase-3; Belongs to the thiolase-like superfamily. FabH family.
 
 
 0.966
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.