STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ61077.1Ca-activated chloride channel family protein. (361 aa)    
Predicted Functional Partners:
SDZ61071.1
Protein of unknown function DUF58.
 
    0.979
SDZ61068.1
MoxR-like ATPase.
 
 
 0.927
SDZ25175.1
Protein of unknown function DUF58.
 
    0.889
SDZ32735.1
Protein of unknown function DUF58.
 
    0.889
SDZ55636.1
Protein of unknown function DUF58.
 
    0.889
SDZ61074.1
Ca-activated chloride channel family protein.
 
    
0.866
SDZ61065.1
Trypsin-like peptidase domain-containing protein.
 
     0.852
SDY77664.1
Magnesium chelatase subunit I.
 
 0.719
SDZ31198.1
Protoporphyrin IX magnesium-chelatase.
  
 0.678
SDZ47067.1
Amino acid adenylation domain-containing protein.
   
  0.592
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.