STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ64466.1Hypothetical protein. (620 aa)    
Predicted Functional Partners:
SDZ64460.1
Hypothetical protein.
 
     0.924
SDZ64437.1
Protein of unknown function.
 
     0.802
SDZ64441.1
Arabinofuranan 3-O-arabinosyltransferase.
 
     0.789
SDZ66638.1
Hypothetical protein.
 
     0.743
SDZ64451.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.714
SDZ64470.1
Putative peptidoglycan binding domain-containing protein.
       0.664
SDZ64456.1
Hypothetical protein.
       0.661
SDY96255.1
Acetyltransferase (GNAT) family protein.
  
     0.555
SDY98412.1
Transglycosylase SLT domain-containing protein.
  
     0.549
SDY94797.1
WG containing repeat-containing protein.
  
     0.534
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.