STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ64764.1Predicted O-methyltransferase YrrM. (191 aa)    
Predicted Functional Partners:
SDZ64743.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
       0.768
SDZ64749.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
       0.768
SDZ64753.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
       0.768
SDZ64758.1
Myo-inositol 2-dehydrogenase.
       0.768
SDZ47067.1
Amino acid adenylation domain-containing protein.
  
 0.750
SDZ47170.1
Non-ribosomal peptide synthetase component F.
  
 0.750
SDZ47926.1
Alcohol dehydrogenase, class IV.
    
  0.637
SDZ64739.1
Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.
       0.599
SDY75539.1
Hypothetical protein.
  
  
 0.585
SDY90865.1
D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family.
   
 
  0.574
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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