STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ65177.1Predicted arabinose efflux permease, MFS family. (429 aa)    
Predicted Functional Partners:
SDZ65173.1
HEXXH motif-containing protein.
       0.773
SDZ26526.1
Predicted arabinose efflux permease, MFS family.
  
     0.760
SDZ67720.1
Transmembrane secretion effector.
  
     0.757
SDY64002.1
Predicted arabinose efflux permease, MFS family.
  
     0.754
SDY96018.1
Transmembrane secretion effector.
  
     0.753
SDZ47130.1
Major Facilitator Superfamily protein.
  
     0.746
SDZ22263.1
Predicted arabinose efflux permease, MFS family.
  
     0.732
SDZ63988.1
Predicted arabinose efflux permease, MFS family.
  
     0.709
SDY61930.1
Predicted arabinose efflux permease, MFS family.
  
     0.697
SDZ65169.1
Uncharacterized protein.
       0.671
Your Current Organism:
Asanoa ishikariensis
NCBI taxonomy Id: 137265
Other names: A. ishikariensis, Asanoa ishikariensis Lee and Hah 2002, Catellatispora ishikariense, Catellatospora ishikariense, DSM 44718, IFO 14551, IMSNU 22004, JCM 11895, NBRC 14551, strain 6432-C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.