STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMEPA1Prostate transmembrane protein, androgen induced 1. (150 aa)    
Predicted Functional Partners:
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.816
FBL
Uncharacterized protein.
   
 
 0.708
TRMT112
Uncharacterized protein.
   
 0.650
TSR1
TSR1 ribosome maturation factor.
   
 0.629
BYSL
Bystin like.
   
 0.624
SMAD2
Mothers against decapentaplegic homolog.
    
 0.577
SMAD3
Mothers against decapentaplegic homolog.
    
 0.577
DDX17
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.574
DDX21
DExD-box helicase 21.
   
 0.574
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.574
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.