STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102443376H15 domain-containing protein. (173 aa)    
Predicted Functional Partners:
CBX3
Chromobox 3.
    
 0.551
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.526
CDK2
Cyclin dependent kinase 2.
   
 0.521
CDK3
Cyclin dependent kinase 3; Belongs to the protein kinase superfamily.
   
 0.521
H1-0
H1 histone family member 0.
   
 0.484
KPNB1
Karyopherin subunit beta 1.
    
   0.463
DFFB
DNA fragmentation factor subunit beta.
    
 0.458
HP1BP3
Heterochromatin protein 1 binding protein 3.
   
 0.447
CCNE1
Cyclin E1; Belongs to the cyclin family.
    
   0.438
STN1
CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.
    
 0.424
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.