STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K7EZ08_PELSIUncharacterized protein. (281 aa)    
Predicted Functional Partners:
POLR2B
RNA polymerase II subunit B; Belongs to the RNA polymerase beta chain family.
   
 0.929
SUPT5H
Transcription elongation factor SPT5.
   
 0.913
POLR2E
RNA polymerase II subunit E.
    
 0.909
POLR2D
RNA polymerase II subunit D.
    
 0.909
POLR2K
RNA polymerase II subunit K.
    
 0.909
POLR2G
RNA polymerase II subunit G.
   
 0.909
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.909
LOC102453643
RNA polymerase II subunit J.
    
 0.909
POLR2L
RNA polymerase II subunit L.
    
 0.909
POLR2F
RNA polymerase II subunit F.
    
 0.909
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.