STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC160Coiled-coil domain containing 160. (323 aa)    
Predicted Functional Partners:
LSS
Lanosterol synthase.
  
 0.806
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.713
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 
 0.712
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 
 0.706
CH25H
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.701
FAXDC2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 0.701
MSMO1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.701
SQLE
Squalene epoxidase.
   
 0.689
FDFT1
Uncharacterized protein.
  
 
 0.619
LOC102453483
Uncharacterized protein.
  
 
 0.619
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.