Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XCR1X-C motif chemokine receptor 1. (320 aa)    
Predicted Functional Partners:
LOC102457828
SCY domain-containing protein.
   
 
 0.965
BATF3
Basic leucine zipper ATF-like transcription factor 3.
      
 0.670
CD4
Ig-like domain-containing protein.
   
  
 0.565
CADM1
Cell adhesion molecule 1.
      
 0.542
FLT3
Fms related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 
 0.541
LY75
Uncharacterized protein.
     
 0.471
SLC6A20
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.459
LZTFL1
Leucine zipper transcription factor like 1.
     
 0.453
CLDN23
Claudin 23.
      
 0.449
CIITA
NACHT domain-containing protein.
   
 
 0.417
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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