Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCR6C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family. (348 aa)    
Predicted Functional Partners:
CCL20
C-C motif chemokine.
     
 0.997
CD4
Ig-like domain-containing protein.
   
  
 0.620
K7FK04_PELSI
Uncharacterized protein.
      
 0.598
IL22
Interleukin 22.
      
 0.557
IL1R2
Interleukin 1 receptor type 2.
      
 0.557
IFNG
Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons.
      
 0.556
IRF6
Interferon regulatory factor 6.
      
 0.547
IL10
Interleukin 10.
      
 0.545
LOC102459758
IGv domain-containing protein.
   
  
 0.528
CCL5
C-C motif chemokine ligand 5.
    
 0.522
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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