STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAHD1Fumarylacetoacetate hydrolase domain containing 1. (227 aa)    
Predicted Functional Partners:
FAH
Fumarylacetoacetase.
     
 0.954
FH
Fumarate hydratase.
  
 0.857
SDHC
Succinate dehydrogenase complex subunit C.
  
 
  0.806
SDHD
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
     
  0.800
HGD
Homogentisate 1,2-dioxygenase.
  
 
 0.782
LOC102451355
tRNA-synt_1 domain-containing protein.
  
 
 0.580
CYB5R4
Cytochrome b5 reductase 4.
  
  
 0.568
ALDH7A1
Aldehyde dehydrogenase 7 family member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.561
HPD
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.559
HMGCL
3-hydroxy-3-methylglutaryl-CoA lyase.
  
 
 0.502
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.