Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
FAHD1Fumarylacetoacetate hydrolase domain containing 1. (227 aa)    
Predicted Functional Partners:
FAH
Fumarylacetoacetase.
     
 0.953
FH
Fumarate hydratase.
  
 0.826
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
 
 0.818
SDHC
Succinate dehydrogenase complex subunit C.
  
 
  0.804
SDHD
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
     
  0.800
HGD
Homogentisate 1,2-dioxygenase.
  
 
 0.670
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
    
 
 0.625
ALDH7A1
Aldehyde dehydrogenase 7 family member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.595
DNAJC14
J domain-containing protein.
      
 0.590
BRICD5
BRICHOS domain containing 5.
      
 0.556
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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