STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM53Transmembrane protein 53. (171 aa)    
Predicted Functional Partners:
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
      
 0.568
ACBD6
Acyl-CoA binding domain containing 6.
      
 0.568
B3GLCT
Beta 3-glucosyltransferase.
      
 0.566
TMEM223
Transmembrane protein 223.
      
 0.565
TMEM147
Transmembrane protein 147.
      
 0.555
ERI3
ERI1 exoribonuclease family member 3.
      
 0.551
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
      
 0.545
DMAP1
DNA methyltransferase 1 associated protein 1.
      
 0.540
KIFAP3
Kinesin associated protein 3.
      
 0.540
SH3YL1
SH3 and SYLF domain containing 1.
      
 0.473
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.