Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTERF2Mitochondrial transcription termination factor 2. (383 aa)    
Predicted Functional Partners:
FASTKD2
FAST kinase domains 2.
   
 0.755
TFB2M
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.495
RAG2
Recombination activating 2.
  
     0.487
TEFM
Transcription elongation factor, mitochondrial.
   
  
 0.481
TRUB2
TruB pseudouridine synthase family member 2.
   
 0.461
B3GNT2
Hexosyltransferase.
  
     0.456
POLG2
DNA polymerase gamma 2, accessory subunit.
      
 0.445
PINK1
PTEN induced kinase 1.
     
 0.425
TMEM70
Transmembrane protein 70.
      
 0.424
PIK3CD
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
      
 0.411
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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