Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102445328Histone H2A; Belongs to the histone H2A family. (129 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.769
LOC102444105
Histone H2B; Belongs to the histone H2B family.
  
 0.723
LOC102452578
Histone H2B; Belongs to the histone H2B family.
  
 0.721
LOC102453087
Histone H2B 8.
  
 0.721
LOC102454821
Histone H2B; Belongs to the histone H2B family.
  
 0.721
LOC102455573
Histone H2B 8.
  
 0.721
LOC102446769
Histone H2B 8.
  
 0.721
LOC102451747
Histone H2B 1/2/3/4/6.
  
 0.721
LOC102449128
Histone H2B; Belongs to the histone H2B family.
  
 0.720
K7F7E8_PELSI
Histone H2B; Belongs to the histone H2B family.
  
 0.717
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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