STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102446729Protein MIS12 homolog. (210 aa)    
Predicted Functional Partners:
DSN1
DSN1 component of MIS12 kinetochore complex.
    
 0.958
PMF1
Polyamine modulated factor 1.
    
 0.867
NDC80
NDC80 kinetochore complex component.
   
 0.835
KNL1
Kinetochore scaffold 1.
   
 0.823
NUF2
NUF2 component of NDC80 kinetochore complex.
   
 0.814
SPC25
SPC25 component of NDC80 kinetochore complex.
    
 0.809
ZWINT
Uncharacterized protein.
    
 
 0.735
BUB1B
BUB1 N-terminal domain-containing protein.
    
 0.693
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
    
 0.674
DMC1
Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.
   
 0.491
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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