Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
K7F0G2_PELSIUncharacterized protein. (83 aa)    
Predicted Functional Partners:
K7GG22_PELSI
Uncharacterized protein.
      
 0.758
RSPO1
R-spondin 1.
      
 0.625
LOC102463077
Uncharacterized protein.
      
 0.539
EGF
Epidermal growth factor.
      
 0.527
SHH
Sonic hedgehog signaling molecule.
   
  
 0.513
FGF2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.510
FST
Follistatin.
      
 0.509
BMP2
Bone morphogenetic protein 2.
    
 0.481
BMP4
Bone morphogenetic protein 4.
    
 0.481
WRN
WRN RecQ like helicase.
      
 0.459
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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