Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102447356Uncharacterized protein. (647 aa)    
Predicted Functional Partners:
ZNF516
C2H2-type domain-containing protein.
 
     0.926
KDM1A
Lysine demethylase 1A.
    
 0.886
RCOR1
REST corepressor 1.
    
 0.880
SLC35F1
Solute carrier family 35 member F1.
      
 0.841
CTBP1
C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.793
CTBP2
C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.793
SDK1
Sidekick cell adhesion molecule 1.
     
 0.712
BICC1
BicC family RNA binding protein 1.
      
 0.710
IBTK
Inhibitor of Bruton tyrosine kinase.
    
 0.698
PRDM16
PR/SET domain 16.
    
 
 0.672
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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