Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
K7F0N1_PELSIF5/8 type C domain-containing protein. (64 aa)    
Predicted Functional Partners:
CNTN1
Contactin 1.
   
 0.678
CNTN3
Contactin 3.
   
 0.534
CNTN4
Uncharacterized protein.
   
 0.534
CNTN6
Contactin 6.
   
 0.526
CNTN5
Contactin 5.
   
 0.526
CNTN2
Contactin 2.
   
 0.526
NFASC
Neurofascin.
   
 0.493
CHL1
Cell adhesion molecule L1 like.
   
 0.443
LOC102448806
Uncharacterized protein.
   
 0.443
NRCAM
Uncharacterized protein.
   
 0.443
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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