Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
K7F0S7_PELSIUncharacterized protein. (228 aa)    
Predicted Functional Partners:
K7EXF7_PELSI
Uncharacterized protein.
   
 0.773
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.601
PIN1
Peptidyl-prolyl cis-trans isomerase.
   
 0.591
SNW1
SNW domain containing 1.
    
 0.585
BUD31
BUD31 homolog.
   
 0.564
PRPF19
Pre-mRNA processing factor 19.
   
 0.539
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.539
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.530
NUP155
Nucleoporin 155.
    
 0.516
NUP88
Nucleoporin 88.
    
 0.513
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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