Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
K7F0T6_PELSIUncharacterized protein. (375 aa)    
Predicted Functional Partners:
OPTN
Optineurin.
    
 
 0.784
UBE2K
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.740
SETD2
SET domain containing 2, histone lysine methyltransferase.
    
 
 0.733
DSN1
DSN1 component of MIS12 kinetochore complex.
   
  0.720
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
 0.707
K7FIX1_PELSI
GSAP-16 domain-containing protein.
    
 
 0.705
SQSTM1
Sequestosome 1.
    
 
 0.705
SNCA
Alpha-synuclein; Belongs to the synuclein family.
   
 
 0.663
TRAK1
Trafficking kinesin protein 1.
    
 
 0.633
TRAK2
Trafficking kinesin protein 2.
    
 
 0.633
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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