Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102451988Histone H2B; Belongs to the histone H2B family. (126 aa)    
Predicted Functional Partners:
LOC102452839
Histone H2A; Belongs to the histone H2A family.
  
 0.714
H2AX
Histone H2A; Belongs to the histone H2A family.
  
 0.714
LOC102455336
Histone H2A; Belongs to the histone H2A family.
  
 0.711
LOC102445328
Histone H2A; Belongs to the histone H2A family.
  
 0.711
LOC102451028
Histone H2A; Belongs to the histone H2A family.
  
 0.710
LOC102461453
Histone H2A; Belongs to the histone H2A family.
  
 0.709
LOC102447009
Histone H2A.J.
  
 0.709
LOC102448896
Histone H2A.J.
  
 0.709
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.704
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.693
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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