Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC30Uncharacterized protein. (297 aa)    
Predicted Functional Partners:
ESPNL
Espin like.
    
 0.767
LRRC20
Leucine rich repeat containing 20.
  
   
 0.760
CYP26C1
Cytochrome P450 family 26 subfamily C member 1; Belongs to the cytochrome P450 family.
      
 0.715
TWSG1
Twisted gastrulation BMP signaling modulator 1.
      
 0.679
ATP1B4
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
   
  
 0.602
ASB8
Ankyrin repeat and SOCS box containing 8.
    
 0.568
ELF4
Elf-1_N domain-containing protein.
      
 0.556
ELF1
E74 like ETS transcription factor 1.
      
 0.556
TMEM38A
Transmembrane protein 38A.
    
 
 0.534
K7FRP1_PELSI
Uncharacterized protein.
  
 
  0.529
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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