Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102453786Uncharacterized protein. (437 aa)    
Predicted Functional Partners:
KCNJ16
Potassium voltage-gated channel subfamily J member 16.
     
  0.596
KCNJ4
Potassium voltage-gated channel subfamily J member 4.
     
 0.561
GJA1
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
    
 
 0.560
TNNI1
Troponin I1, slow skeletal type.
      
 0.556
ERG
ETS transcription factor ERG.
      
 0.556
GABBR2
Gamma-aminobutyric acid type B receptor subunit 2.
    
 0.556
GNB1
G protein subunit beta 1.
    
 0.543
GNB4
G protein subunit beta 4.
    
 0.543
GNGT2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.529
KCNJ5
Potassium voltage-gated channel subfamily J member 5.
   
  0.521
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
Server load: low (18%) [HD]