Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H1-10H1 histone family member X. (189 aa)    
Predicted Functional Partners:
RSL1D1
Ribosomal L1 domain containing 1.
    
   0.884
HP1BP3
Heterochromatin protein 1 binding protein 3.
   
 
 0.744
H1-0
H1 histone family member 0.
   
 
 0.720
NPM2
Nucleophosmin/nucleoplasmin 2.
    
  0.629
NPM1
Uncharacterized protein.
    
  0.629
RRP1B
Ribosomal RNA processing 1B.
   
   0.611
MAPT
Microtubule-associated protein.
    
   0.592
LARP7
La ribonucleoprotein domain family member 7.
    
   0.592
K7F1V9_PELSI
H15 domain-containing protein.
      
 0.557
SLC25A42
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.531
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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