Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
K7F137_PELSIUncharacterized protein. (382 aa)    
Predicted Functional Partners:
DCUN1D4
DCN1-like protein.
      
 0.610
AOAH
Acyloxyacyl hydrolase.
      
 0.607
CDC42
Cell division cycle 42.
    
 0.549
NPHS1
NPHS1 adhesion molecule, nephrin.
   
  
 0.548
NPHS2
NPHS2 stomatin family member, podocin.
      
 0.544
WDFY3
WD repeat and FYVE domain containing 3.
   
  
 0.469
ARHGDIB
Rho GDP dissociation inhibitor beta.
   
  
 0.426
ARHGDIA
Rho GDP dissociation inhibitor alpha.
   
  
 0.426
DCUN1D5
DCN1-like protein.
      
 0.423
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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