STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERDUncharacterized protein. (776 aa)    
Predicted Functional Partners:
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
  
 
 0.965
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
  
 0.964
CATSPER2
Cation channel sperm associated 2.
  
 
 0.958
CATSPER3
Cation channel sperm associated 3.
    
 0.950
K7FMP6_PELSI
Ion_trans domain-containing protein.
    
 0.916
TMEM238
Transmembrane protein 238.
   
 0.819
CATSPER4
Ion_trans domain-containing protein.
  
 
 0.786
EFCAB9
EF-hand calcium binding domain 9.
  
 
 
 0.716
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
    
 0.693
CACNA1G
Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...]
    
 0.693
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.