STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN10UBX domain protein 10. (161 aa)    
Predicted Functional Partners:
UBXN6
UBX domain protein 6.
    
 
 0.961
UBXN2A
UBX domain protein 2A.
    
 
 0.961
IFT74
Intraflagellar transport 74.
   
 0.945
IFT88
Intraflagellar transport 88.
    
  0.943
TTC26
Tetratricopeptide repeat domain 26.
    
 0.943
NSFL1C
NSFL1 cofactor.
    
 
 0.942
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 
 0.941
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.928
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.916
UBXN2B
UBX domain protein 2B.
    
 
 0.850
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.