Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102458580Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
DIAPH1
Diaphanous related formin 1.
   
 0.932
DIAPH2
Diaphanous related formin 2.
   
 0.932
ARHGEF18
Uncharacterized protein.
   
 0.930
DAAM1
Dishevelled associated activator of morphogenesis 1.
    
 0.930
ARHGAP35
Rho GTPase activating protein 35.
    
 0.930
ARHGAP29
Rho GTPase activating protein 29.
    
 0.930
DAAM2
Dishevelled associated activator of morphogenesis 2.
    
 0.930
ARHGEF11
Rho guanine nucleotide exchange factor 11.
   
 0.930
ARHGEF12
Rho guanine nucleotide exchange factor 12.
   
 0.930
ARHGAP5
Rho GTPase activating protein 5.
    
 0.930
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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