Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GREM2Gremlin 2, DAN family BMP antagonist. (168 aa)    
Predicted Functional Partners:
BMP6
Bone morphogenetic protein 6.
     
 0.952
BMP2
Bone morphogenetic protein 2.
     
 0.945
BMP7
Bone morphogenetic protein 7.
     
 0.933
BMP5
Bone morphogenetic protein 5.
     
 0.933
K7F492_PELSI
TGF_BETA_2 domain-containing protein.
     
 0.925
K7G9V9_PELSI
TGF_BETA_2 domain-containing protein.
     
 0.925
GDF5
Growth differentiation factor 5.
     
 0.924
GDF7
TGF_BETA_2 domain-containing protein.
     
 0.922
K7GDQ7_PELSI
TGF_BETA_2 domain-containing protein.
     
 0.902
GREM1
Gremlin.
  
  
 
0.901
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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