Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TIGD3Tigger transposable element derived 3. (481 aa)    
Predicted Functional Partners:
CTPS2
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
    
   0.726
CTPS1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
    
   0.726
HARBI1
Harbinger transposase derived 1.
      
 0.697
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.650
LOC102461914
Uncharacterized protein.
   
 
 0.565
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
      
 0.543
FRMD8
FERM domain containing 8.
      
 0.539
SLC25A45
Solute carrier family 25 member 45; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.509
HMGXB3
HMG-box containing 3.
      
 0.509
KCNK7
Ion_trans_2 domain-containing protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.451
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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