STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOGNoggin; Belongs to the noggin family. (223 aa)    
Predicted Functional Partners:
BMP6
Bone morphogenetic protein 6.
    
 0.952
BMP7
Bone morphogenetic protein 7.
    
 0.949
BMP5
Bone morphogenetic protein 5.
    
 0.949
BMP2
Bone morphogenetic protein 2.
    
 0.948
GDF7
TGF_BETA_2 domain-containing protein.
    
 0.941
GDF5
Growth differentiation factor 5.
    
 0.933
K7G9V9_PELSI
TGF_BETA_2 domain-containing protein.
    
 0.926
GDF10
Growth differentiation factor 10.
    
 0.594
APTX
Aprataxin.
      
 0.585
K7GG22_PELSI
Uncharacterized protein.
      
 0.563
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.