Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOGNoggin; Belongs to the noggin family. (223 aa)    
Predicted Functional Partners:
BMP6
Bone morphogenetic protein 6.
    
 0.958
BMP2
Bone morphogenetic protein 2.
    
 0.954
BMP7
Bone morphogenetic protein 7.
    
 0.949
BMP5
Bone morphogenetic protein 5.
    
 0.949
GDF5
Growth differentiation factor 5.
    
 0.938
GDF7
TGF_BETA_2 domain-containing protein.
    
 0.935
K7GDQ7_PELSI
TGF_BETA_2 domain-containing protein.
    
 0.926
K7F492_PELSI
TGF_BETA_2 domain-containing protein.
    
  0.924
K7G9V9_PELSI
TGF_BETA_2 domain-containing protein.
    
  0.924
RANBP1
RAN binding protein 1.
      
 0.731
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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