Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
K7F1M4_PELSIUncharacterized protein. (56 aa)    
Predicted Functional Partners:
CCNE1
Cyclin E1; Belongs to the cyclin family.
   
 0.987
SKP2
S-phase kinase associated protein 2.
    
 0.986
CCNE2
Cyclin E2; Belongs to the cyclin family.
   
 0.984
CCND1
Cyclin D1; Belongs to the cyclin family.
   
 0.984
CCNA2
Cyclin A2; Belongs to the cyclin family.
   
 0.984
CCNA1
Cyclin A1; Belongs to the cyclin family.
   
 0.982
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.980
CDK2
Cyclin dependent kinase 2.
   
 0.978
CDK6
Cyclin dependent kinase 6; Belongs to the protein kinase superfamily.
   
 0.975
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.974
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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