Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CKAP2LCKAP2_C domain-containing protein. (53 aa)    
Predicted Functional Partners:
CENPE
Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.909
CEP55
Centrosomal protein 55.
   
 
 0.750
NUSAP1
Uncharacterized protein.
   
  
 0.719
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
  
 0.717
ECT2
Epithelial cell transforming 2.
   
  
 0.674
DTL
Denticleless E3 ubiquitin protein ligase homolog.
   
  
 0.666
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.659
PARPBP
PARP1 binding protein.
   
  0.653
POLR2B
RNA polymerase II subunit B; Belongs to the RNA polymerase beta chain family.
   
 0.641
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.630
Your Current Organism:
Pelodiscus sinensis
NCBI taxonomy Id: 13735
Other names: Chinese soft-shelled turtle, Chinese softshell turtle, P. sinensis, Trionyx sinensis, ZMB 38
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